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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905629.1_cds_XP_016455884.1_49773
CDS Infomation

[gene=LOC107779897] [db_xref=GeneID:107779897] [protein=alpha-galactosidase 3-like] [protein_id=XP_016455884.1] [location=join(11832..12040,12801..12859,12970..13026,13106..13140,13268..13371,13505..13577,14007..14065,14144..14209,14299..14382,14691..14755,14845..14927,15366..15456,15617..15675,17087..17227,17424..17534)] [gbkey=CDS]
Sequence

ATGGCAAAGTCCTCTGGCATTCTTGCCACTGCGGCTACGCTTGTGTCTTTGACTGTGTTT
TTAATGTCAGTGACAGTCACGGCAAGAGAGTTTCCAATTCATCCTTATTTGAAAATTCAA
GATAGACTCTCCATATCTCAGCTCTATGATACTTCCAATTATGGTGTTCTTCAAATCGAC
AATGGCTTGGCTCGAACTCCTCAGATGGGGTGGAGTACCTGGAATTTTTTTGCTTGCAAT
ATTAATGAAACAGTCATCAAGGAAACAGCTGATGCACCCGTATCAACTGGTTTGGCTAGC
CTGGGTTATACTTATGTCAACATCGATGATTGTTGGTCCAGATTGACTCGAGATTTAAAG
GGTCAAATGATTCCTGACCTGAAAACTTTTCCATCTGGAATTAAAGCTCTAGCTGATTAT
GTGCACTCAAAGGGTCTAAAGCTAGGTGTTTATTCTGATGCTGGGGCTTTTACATGTCAA
GTTCGACCTGGCTCACTGTTTCATGAAAAAAATGATGCTGAACTTTGGGCATCTTGGGGT
GTTGACTATTTGAAGTACGACAACTGCTTCAATCTAGGCCTCCCACCACAAAAGAGACAC
CCGCCCATGCGTGATGCCCTTAATACTACTGGACGGACTATATTTTACGCACTTTGTGAA
TGGGGTGTCGATGACCCTGCCAAATGGGCTGGAAAAATTGGAAACAGTTGGCGTACAACA
GATGACATCAATGATACATGGGCTAGCATGACAACTATTGCTGATATCAATGACAAGTGG
GCATCGTATGCTGGACCTGGTGGATGGAACGATCCTGATATGTTTGAGGTTGGAAATGGG
GGCATGAATTACCACGAGTACAAAGGGCACTTTAGCATTTGGGCTTTGATGAAGGCTTCA
CTTATTATTGGTTGTGATGTCAGAAACATCACCGCTGAAACTTTAGAAATTCTTTCCAAT
AAAGAGGTTATCGCTGTTGACCAAGATCCACTTGGTGTTCAGGGTAGGAGAGTTTATGCT
TCCGGATCAGATGGTTGCGAGCAGATTTGGGCAGGTCCCTTGTCTGGAAACCGTTTGGCC
GTAGTACTCTGGAATAGATGTTCAAAGGCTGCAACTATTACTGCTAAATGGGGTGCAATT
GGATTAGAATCTTCTATCGGCGTCTCTGTTAGAGACTTGTGGAAGCATGAAGTTGTTTTG
GAGAACACTGTGGGCTCATTCAGTGCTCGGGTTGATGCTCATGGCTGTGAAATGTACATT
TTAACTCCAAAGAGGGCGACTCTAGCTTCAATCTGA

Peptide Sequence

PEP ID

XP_016455884.1
PEP Infomation

PREDICTED: alpha-galactosidase 3-like [Nicotiana tabacum]
Sequence

MAKSSGILATAATLVSLTVFLMSVTVTAREFPIHPYLKIQDRLSISQLYDTSNYGVLQID
NGLARTPQMGWSTWNFFACNINETVIKETADAPVSTGLASLGYTYVNIDDCWSRLTRDLK
GQMIPDLKTFPSGIKALADYVHSKGLKLGVYSDAGAFTCQVRPGSLFHEKNDAELWASWG
VDYLKYDNCFNLGLPPQKRHPPMRDALNTTGRTIFYALCEWGVDDPAKWAGKIGNSWRTT
DDINDTWASMTTIADINDKWASYAGPGGWNDPDMFEVGNGGMNYHEYKGHFSIWALMKAS
LIIGCDVRNITAETLEILSNKEVIAVDQDPLGVQGRRVYASGSDGCEQIWAGPLSGNRLA
VVLWNRCSKAATITAKWGAIGLESSIGVSVRDLWKHEVVLENTVGSFSARVDAHGCEMYI
LTPKRATLASI

Transcript Sequence

Gene sequence data has not been registered.